Requirements of the SBPOP PACKAGE

MATLAB

The minimum version of MATLAB should be: R2010a

COMMERCIAL MATLAB TOOLBOXES

SBTOOLBOX2 and SBPD do NOT require any commercial MATLAB toolboxes (only exception are the model reduction functions, which do require the symbolic toolbox)
SBPOP requires the presence of the statistics toolbox (otherwise handling datasets is just messy)

WINDOWS/MATLAB 64bit

On 64bit Windows systems with a 64bit MATLAB installation you need to install a C/C++ compiler that is compatible with MATLAB.
Please check here: Mathworks Supported and Compatible Compilers.

MONOLIX

The minimum required version of Monolix is: 4.2.0
The latest version SBPOP has been tested with is: 4.3.3

NONMEM

The minimum required version of NONMEM is: 7.2
The latest version SBPOP has been tested with is: 7.2

SBPOP PUBLICATIONS

Publications, discussing results obtained with the help of the SBPOP PACKAGE, are asked to reference the most relevant of the following papers and additionally the link to this webpage:

Systems Biology Toolbox for MATLAB: A computational platform for research in Systems Biology, Bioinformatics, 22(4), 514-515, 2006, doi:10.1093/bioinformatics/bti799
SBaddon: high performance simulation for the Systems Biology Toolbox for MATLAB, Bioinformatics, 23(5), 646-647, 2007, doi:10.1093/bioinformatics/btl668
SBPOP Package: Efficient support for model based drug development – from mechanistic models to complex trial simulation, PAGE meeting, Glasgow, UK [abstract]
Enhancing population pharmacokinetic modeling efficiency and quality using an integrated workflow, Journal of Pharmacokinetics and Pharmacodynamics, doi:10.1007/s10928-014-9370-4, 2014.

SBPOP NEWS

16th March 2015: Many small improvements ... also SBML export now fully working again
20th January 2015: Many improvements ... Windows 64bit support and compatibility with MATLAB versions >=R2014B
28th July 2014: Happy to announce that our paper about efficient conduct of popPK anlalyses has been published (doi:10.1007/s10928-014-9370-4)
3rd July 2014: Update to Revision 1361 (due to packaging bug in Rev 1352)
18th June 2014: Update to Revision 1352 (popPK modeling workflow MONOLIX and NONMEM, "median" modeling support)
25th March 2014: Update to Revision 1278
7th May 2013: Revision 1172 had a minor bug due to packaging of the public version - main impact on running SBPDgui. Fixed now in Revision 1176
2nd May 2013: SBTOOLBOX2 and SBPD are now integrated into the same package, called "SBPOP PACKAGE". The new combined package additionally includes "SBPOP", focusing on PK/PKPD/PBPK models, population modeling, nonlinear mixed effect parameter estimation, clinical trial simulation